Alysa's SP is wonderful and she's consistently scored well with it, it would be a bizarre decision to scrap it and start over (or worse, go back to an older lesser program).
I'm also really worried and angry that Bradie's team seems to be prioritizing "Beijing or bust" over Bradie's actual long-term health. If it's touch-and-go whether Bradie can actually get through her programs in Nashville then I'm sorry but she should not be in the conversation for the Olympic team, full-stop. Forcing herself to skate on a still injured foot when the problem hasn't even been diagnosed (!!!) is a recipe for disaster, and if she can barely do it in January the odds are she aggravates her foot so she can't do it in February and possibly even winds up with permanent chronic pain. If the situation is anywhere near as bad as it sounds in that interview, Bradie should not be competing.
Edit: I re-read the article and see that there have been "many" diagnosis, so I retract the bit about not being diagnosed though it is concerning that Bradie hasn't received consistent diagnosis by her account/